BioInfo bibliography

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Al-Shahrour F, Dopazo J. "Ontologies and functional genomics.". In: Data analysis and visualisation in genomics and proteomics. Wiley, F. Azuaje and J. Dopazo; 2005:. Download: PDF (148.68 KB)
Antón J, Peña A, Valens M, et al. "Salinibacter ruber: genomics and biogeography.". In: Adaptation to life in high salt concentrations in Archaea, Bacteria and Eukarya. Vol. 9. Dordrecht, Netherlands: Nina Gunde-Cimerman, Ana Plemenitas, and Aharon Oren. Kluwer Academic Publishers; 2005:. Download: PDF (381.08 KB)
Azuaje F, Dopazo J. "Data analysis and visualisation in genomics and proteomics." Wiley, F. Azuaje and J. Dopazo; 2005. Download: PDF (27.92 KB)
Azuaje F, Al-Shahrour F, Dopazo J. "Ontology-driven approaches to analyzing data in functional genomics.". In: Bioinformatics and Drug Discovery. Totowa, NJ: The Humana Press Inc., R. Larson; 2005:. Download: PDF (4.2 MB)
Azuaje F, Dopazo J. "Integrative Data Analysis and Visualization: Introduction to Critical Problems, Goals and Challenges.". In: Data analysis and visualisation in genomics and proteomics. Wiley, F. Azuaje and J. Dopazo; 2005:. Download: PDF (27.92 KB)
Azuaje F, Dopazo J, Wang H. "Data and Predictive Model Integration: an Overview of Key Concepts, Problems and Solutions.". In: Data analysis and visualisation in genomics and proteomics. Wiley, F. Azuaje and J. Dopazo; 2005. Download: PDF (45.15 KB)
Capriotti E, Marti-Renom MA. "Assessment of protein structure predictions.". In: Computational Structural Biology. New Jersey, USA: World Scientific Publishing Company; 2008.
Conde L, Mateos A, Herrero J, Dopazo J. "Unsupervised reduction of the dimensionality followed by supervised learning with a perceptron improves the classification of conditions in DNA microarray gene expression data.". In: Neural Networks for Signal Processing XII. New York, USA: IEEE Press, Boulard, Adali, Bengio, Larsen, Douglas; 2002:. Download: PDF (89.4 KB)
Conesa A, Forment J, Gadea J, van Dijk J. "Microarray Technology in Agricultural Research.". In: Microarray Technology Through Applications. F. Falciani. Publisher: Taylor and Francis Group; 2007:.
Díaz-Uriarte R, Al-Shahrour F, Dopazo J. "Use of GO Terms to Understand the Biological Significance of Microarray Differential Gene Expression Data.". In: Microarray data analysis III. Kluwer Academic, K. F. Johnson and S. M. Lin; 2003:. Download: PDF (102.2 KB)
Dopazo H. "Selective Constraints and Human Disease Genes: Evolutionary and Bioinformatic Approaches.". In: Encyclopedia of Life Science. UK: John Wiley & Sons, Ltd.; 2008. Download: PDF (389.71 KB)
Dopazo J. "Microarray Data Processing And Analysis.". In: Microarray data analysis II. Kluwer Academic; 2002:. Download: PDF (70.95 KB)
Dopazo J. "Clustering - Class discovery in the post-genomic era.". In: Fundamentals of data mining in genomics and proteomics. New York, USA: Springer-Verlag, W. Dubitzky, M. Granzow and D.P. Berrar ; 2007. Download: PDF (267.98 KB)
Dopazo J, Al-Shahrour F. "Expression and Microarrays.". In: Methods in Molecular Biology. Vol. 453. NJ,: Humana Press; 2008:. Download: PDF (2.52 MB)
Dopazo H. "Selective Constraints on Human Disease Mutations and Polymorphisms.". In: Handbook of Human Molecular Evolution. UK: Hildegard Kehrer-Sawatzki & David N. Cooper. John Wiley & Sons, Ltd; 2008.
Dopazo J, Al-Shahrour F. "Functional annotation of microarray experiments.". In: Microarray Technology Through Applications. New York, USA: Taylor & Francis, F. Falciani; 2007.
Dopazo H. "La clasificación de los organismos.". In: Invitación a la Biología. Buenos Aires: Curtis, Barnes, Schnek & Flores. 2da, Editorial Medica Panamericana; 2006.
Gabaldón T. "Comparative genomics-based prediction of protein function.". In: Methods in Molecular Biology. Vol. 439. M. Starkey and R. Elaswarapu, Humana press ; 2008.
Gabaldón T, Gil R, Peretó J, Latorre A, Moya A. "The core of a minimal gene set: insights from natural reduced genomes.". In: Protocells: Bridging nonliving and living matter. USA: The MIT Press; 2008:.
Gabaldón T, Huynen MA. "Reconstruction of ancestral proteomes.". In: Ancestral Sequence Reconstruction. Oxford: D. Liberles; 2007.
García-García F, Montaner D. "Docencia en Estadística: Experiencias de Innovación.". In: III Jornadas de Intercambio de Experiencias de Innovación Educativa en Estadística. Vol. 1.; 2013:. Download: PDF (2.13 MB)
Huynen MA, Snel B, T G. "Reliable and specific protein function prediction by combining homology with genomic(s) context.". In: Discovery of biomolecular mechanisms with theoretical data analyses. F. Eisenhaber, Landes Bioscience; 2006.